Remove aims-install-irkernel

2018.1/aims-desktop-2017/bin/aims-release-upgrade

@@ -39,4 +39,4 @@ mv /usr/local/lib/R/site-library /usr/local/lib/R/site-library.stretch
 echo "R has been upgraded. Please re-install your locally installed R packages."
 echo "You can safely remove /usr/local/lib/R/site-library.stretch"
 echo "You can also aims-install-rstudio to get the latest version of RStudio,"
-echo "and aims-install-irkernel to get the R kernel for Jupyter."
+echo "Note r-cran-irkernel is now in the AIMS PPA and in AIMS Desktop by default."

2018.1/aims-desktop-2017/debian/changelog

+aims-desktop (1:2019.07.10) stretch; urgency=medium
+
+  * Change IRKernel message in aims-release-upgrade
+
+ -- Jan Groenewald <jan@aims.ac.za>  Thu, 11 Jul 2019 12:16:57 +0000
+
 aims-desktop (1:2019.07.09) stretch; urgency=medium
 
   * Add test for jessie.list existence

2020.1/aims-desktop/aims-desktop-2020/bin/aims-complete-install

 #!/bin/bash
 
 aims-install-rstudio
-apt-get -y install sagemath-jupyter jupyter-notebook python-notebook spyder3
-aims-install-irkernel
+apt-get -y install sagemath-jupyter jupyter-notebook python-notebook spyder3 r-cran-irkernel
 apt-get -y dist-upgrade
 apt-get clean
 # clear Mac OSX boot entries in grub (installer USB looks like a Mac disk and get's added to grub)

2020.1/aims-desktop/aims-desktop-2020/bin/aims-install-irkernel

-#!/bin/bash
-
-apt-get --no-install-recommends -y install build-essential jupyter-notebook r-recommended libssl-dev libcurl4-openssl-dev libssh2-1-dev
-Rscript -e "install.packages(c('repr','IRdisplay','crayon','pbdZMQ','devtools'), repos='https://cran.r-project.org', lib='/usr/local/lib/R/site-library/')"
-Rscript -e "devtools::install_github('IRkernel/IRkernel', lib='/usr/local/lib/R/site-library')"
-Rscript -e "IRkernel::installspec(user=FALSE)"
-

2020.1/aims-desktop/aims-desktop-2020/bin/aims-install-r35

@@ -9,6 +9,5 @@ echo "You may want to:"
 echo " * sudo apt-get -y autoremove"
 echo " * sudo apt-get clean"
 echo " * re-install any R packages in ~/.local/lib/R/site-packages or /usr/local/lib/R/site-packages"
-echo " * specifically IRkernel, by removing /usr/local/lib/R/site-packages/* and then sudo aims-install-irkernel"
 
 

2020.1/aims-desktop/aims-desktop-2020/debian/changelog

+aims-desktop (1:2020.48) buster; urgency=medium
+
+  * Remove aims-install-irkernel, r-cran-irkernel is in the AIMS PPA now
+
+ -- Jan Groenewald <jan@aims.ac.za>  Thu, 11 Jul 2019 12:18:18 +0000
+
 aims-desktop (1:2020.47) buster; urgency=medium
 
   * Update aims-install-latest-firefox (change en-ZA to en-GB)

2020.1/aims-desktop/aims-desktop-2020/debian/install

@@ -3,7 +3,6 @@ aims-collect-support-data.png usr/share/pixmaps
 aims-starburst.png usr/share/pixmaps
 bin/aims-collect-support-data usr/bin
 bin/aims-complete-install usr/sbin
-bin/aims-install-irkernel usr/sbin
 bin/aims-install-latest-firefox usr/sbin
 bin/aims-install-macaulay2 usr/sbin
 bin/aims-install-restricted-extras usr/sbin